MARA results: cerebellum, embryo E15, biol

Sample name: cerebellum, embryo E15, biol_rep2 (E15R2)

Sorted Z-values histogram for the sample cerebellum, embryo E15, biol_rep2 (E15R2)

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	4.202	Rfx1 Rfxap Rfx5 Rfxank Rfx4 Rfx3 Rfx2
EWSR1-FLI1.p2	3.174	Fli1 Ewsr1
NRF1.p2	3.080	Nrf1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	3.026	Arnt Max Myc Usf1 Bhlhe40 Arnt2
HOX{A6,A7,B6,B7}.p2	2.963	Hoxb6 Hoxa7 Hoxb7 Hoxa6
UGUGCUU	2.902
ZFP161.p2	2.713	Zfp161
AHR_ARNT_ARNT2.p2	2.608	Arnt Ahr Arnt2
NKX3-1.p2	2.465	Nkx3-1
SOX17.p2	2.438	Sox17
NKX3-2.p2	2.122	Nkx3-2
KLF12.p2	1.976	Klf12
ZBTB16.p2	1.937	Zbtb16
REST.p3	1.896	Rest
EHF.p2	1.645	Ehf
NFE2L2.p2	1.637	Nfe2l2
ELK1,4_GABP{A,B1}.p3	1.545	Gabpa Gabpb1 Elk4 Elk1	$logo of ELK1,4_GABP{A,B1}.p3$
PAX4.p2	1.531	Pax4
UUGGCAC	1.512
TGIF1.p2	1.379	Tgif1
DBP.p2	1.352	Dbp
SOX2.p2	1.343	Sox2
EVI1.p2	1.305	Mecom
HBP1_HMGB_SSRP1_UBTF.p2	1.260	Hmgb2 Hmgb3 Ssrp1 Ubtf Hbp1
ATF6.p2	1.253	Atf6
RREB1.p2	1.242	Rreb1
FOXN1.p2	1.242	Foxn1
NKX2-1,4.p2	1.235	Nkx2-1 Nkx2-4
EGR1..3.p2	1.207	Egr3 Egr1 Egr2
NFIX.p2	1.181	Nfix
ALX1.p2	1.165	Alx1
UAAGACU	1.083
ZNF384.p2	1.039	Zfp384
NFE2L1.p2	1.027	Nfe2l1
GUAAACA	1.022
ZNF423.p2	1.010	Zfp423
UAAGACG	0.993
ATF5_CREB3.p2	0.986	Atf5 Creb3
GCAGCAU	0.964
ACAGUAC	0.961
SRY.p2	0.960	Sry
ETS1,2.p2	0.943	Ets2 Ets1
NKX2-2,8.p2	0.906	Nkx2-2 Nkx2-9
HSF1,2.p2	0.878	Hsf1 Hsf2
NFE2.p2	0.851	Nfe2
ZEB1.p2	0.837	Zeb1
DMAP1_NCOR{1,2}_SMARC.p2	0.833	Smarca1 Smarcc2 Smarca5 Ncor1 Ncor2 Dmap1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AACAGUC	0.816
FOXQ1.p2	0.816	Foxq1
BPTF.p2	0.804	Bptf
TBX4,5.p2	0.794	Tbx5 Tbx4
AGCAGCA	0.786
TBP.p2	0.768	Tbp
ACCCUGU	0.756
AAUACUG	0.754
TCF4_dimer.p2	0.740	Tcf4
CDX1,2,4.p2	0.732	Cdx1 Cdx2 Cdx4
EOMES.p2	0.730	Eomes
POU5F1.p2	0.723	Pou5f1
UGCAUUG	0.674
IKZF2.p2	0.670	Ikzf2
GCUGGUG	0.670
ZIC1..3.p2	0.663	Zic1 Zic2 Zic3
MAFB.p2	0.643	Mafb
GZF1.p2	0.609	Gzf1
RUNX1..3.p2	0.604	Runx1 Runx3 Runx2
NKX6-1,2.p2	0.596	Nkx6-1 Nkx6-2
POU6F1.p2	0.575	Pou6f1
UUGGCAA	0.561
HMX1.p2	0.539	Hmx1
YY1.p2	0.529	Yy1
UUGUUCG	0.507
GFI1B.p2	0.504	Gfi1b
SNAI1..3.p2	0.502	Snai2 Snai1 Snai3
HOX{A5,B5}.p2	0.485	Hoxb5 Hoxa5
FOX{I1,J2}.p2	0.484	Foxi1 Foxj2
ARID5B.p2	0.466	Arid5b
AAGUGCU	0.461
UUUUUGC	0.457
AUGGCAC	0.432
GTF2I.p2	0.422	Gtf2i
ACAUUCA	0.422
TFCP2.p2	0.414	Tcfcp2
ESRRA.p2	0.410	Esrra
T.p2	0.405	T
LHX3,4.p2	0.403	Lhx3 Lhx4
UCAAGUA	0.395
LEF1_TCF7_TCF7L1,2.p2	0.390	Tcf7 Tcf7l2 Lef1 Tcf7l1
TFAP2B.p2	0.376	Tcfap2b
AGCAGCG	0.371
CUCCCAA	0.369
EN1,2.p2	0.330	En1 En2
FOXO1,3,4.p2	0.312	Foxo1 Foxo4 Foxo3
HOX{A4,D4}.p2	0.305	Hoxa4 Hoxd4
SPZ1.p2	0.299	Spz1
GAGAACU	0.274
CAGUGCA	0.266
AACACUG	0.257
GLI1..3.p2	0.250	Gli1 Gli2 Gli3
PDX1.p2	0.246	Pdx1
ATF2.p2	0.243	Atf2
CTCF.p2	0.238	Ctcf
PAX2.p2	0.235	Pax2
MSX1,2.p2	0.223	Msx1 Msx2
BACH2.p2	0.209	Bach2
GAUAUGU	0.198
HLF.p2	0.197	Hlf
GAGGUAG	0.153
RXRG_dimer.p3	0.150	Nr1h2 Rxra Pparg Ppara Rxrb Rxrg
UCCCUUU	0.140
UGAAAUG	0.139
CUACAGU	0.138
RBPJ.p2	0.136	Rbpj
ZNF143.p2	0.133	Zfp143
PATZ1.p2	0.120	Patz1
AAUCUCU	0.116
UCACAGU	0.112
ACUGCAU	0.103
AUGACAC	0.098
STAT5{A,B}.p2	0.090	Stat5b Stat5a
AUUGCAC	0.085
AACGGAA	0.071
PRDM1.p3	0.066	Prdm1
UCCAGUU	0.062
SPIB.p2	0.033	Spib
STAT1,3.p3	0.032	Stat1 Stat3
GAUUGUC	0.024
AAUCUCA	0.020
FOSL2.p2	0.003	Fosl2
PAX8.p2	-0.003	Pax8
ACUGGCC	-0.010
GAUCAGA	-0.012
CCAGUGU	-0.017
AACCGUU	-0.018
ACCCGUA	-0.028
IKZF1.p2	-0.037	Ikzf1
PAX3,7.p2	-0.038	Pax7 Pax3
GGAGUGU	-0.062
AACCUGG	-0.064
EBF1.p2	-0.066	Ebf1
PPARG.p2	-0.076	Pparg
GGCAAGA	-0.080
CRX.p2	-0.082	Crx
GGAAGAC	-0.087
HMGA1,2.p2	-0.091	Hmga1 Hmga2
ATF4.p2	-0.093	Atf4
POU1F1.p2	-0.117	Pou1f1
HOXA9_MEIS1.p2	-0.123	Meis1 Hoxa9
PAX6.p2	-0.138	Pax6
GCUACAU	-0.138
UGACCUA	-0.144
UGUGCGU	-0.145
FOXP3.p2	-0.157	Foxp3
CGUACCG	-0.168
SP1.p2	-0.171	Sp1
MAZ.p2	-0.177	Maz
CGUGUCU	-0.180
AR.p2	-0.186	Ar
NANOG{mouse}.p2	-0.186	Nanog
AAGGUGC	-0.193
AAUGCCC	-0.207
MYFfamily.p2	-0.217	Myod1 Myf6 Myf5 Myog
GAGAUGA	-0.221
TAL1_TCF{3,4,12}.p2	-0.222	Tcf3 Tcf4 Tal1 Tcf12	$logo of TAL1_TCF{3,4,12}.p2$
SREBF1,2.p2	-0.227	Srebf1 Srebf2
FOX{D1,D2}.p2	-0.260	Foxd2 Foxd1
AIRE.p2	-0.262	Aire
GUGCAAA	-0.266
ZNF148.p2	-0.276	Zfp148
GGAAUGU	-0.285
KLF4.p3	-0.294	Klf4
TP53.p2	-0.296	Trp53
PBX1.p2	-0.304	Pbx1
GGACGGA	-0.313
CEBPA,B_DDIT3.p2	-0.330	Ddit3 Cebpa Cebpb
SOX{8,9,10}.p2	-0.345	Sox9 Sox8 Sox10
AGCACCA	-0.385
FOX{C1,C2}.p2	-0.400	Foxc1 Foxc2
FOX{F1,F2,J1}.p2	-0.400	Foxf2 Foxj1 Foxf1a
AUGGCUU	-0.409
NFATC1..3.p2	-0.424	Nfatc3 Nfatc2 Nfatc1
ADNP_IRX_SIX_ZHX.p2	-0.433	Six5 Zhx1 Irx4 Adnp Zhx3 Zhx2 Irx5 Six2
GATA1..3.p2	-0.439	Gata1 Gata2 Gata3
GGCUCAG	-0.440
CUX2.p2	-0.446	Cux2
GGCAGUG	-0.447
UCACAUU	-0.449
GUAACAG	-0.451
NHLH1,2.p2	-0.470	Nhlh1 Nhlh2
MZF1.p2	-0.487	Mzf1
GUCAGUU	-0.497
AGUGGUU	-0.523
GUAGUGU	-0.545
FOXD3.p2	-0.561	Foxd3
MYB.p2	-0.566	Myb
RXRA_VDR{dimer}.p2	-0.568	Vdr	$logo of RXRA_VDR{dimer}.p2$
UUGGUCC	-0.584
TLX2.p2	-0.592	Tlx2
FEV.p2	-0.595	Fev
CCUUCAU	-0.597
GFI1.p2	-0.608	Gfi1
FOXL1.p2	-0.627	Foxl1
AGUGCAA	-0.637
PITX1..3.p2	-0.653	Pitx2 Pitx3 Pitx1
SOX5.p2	-0.666	Sox5
CAGCAGG	-0.666
ZBTB6.p2	-0.667	Zbtb6
UAAUGCU	-0.672
CCAGCAU	-0.683
AGGUAGU	-0.713
NR3C1.p2	-0.721	Nr3c1
SPI1.p2	-0.724	Sfpi1
PRRX1,2.p2	-0.734	Prrx2 Prrx1
FOXA2.p3	-0.767	Foxa2
VSX1,2.p2	-0.779	Vsx2 Vsx1
LMO2.p2	-0.794	Lmo2
HAND1,2.p2	-0.795	Hand1 Hand2
AGCUUAU	-0.802
MYOD1.p2	-0.807	Myod1
POU3F1..4.p2	-0.811	Pou3f1 Pou3f3 Pou3f2 Pou3f4
SRF.p3	-0.820	Srf
NR6A1.p2	-0.854	Nr6a1
PAX5.p2	-0.856	Pax5
IRF1,2,7.p3	-0.874	Irf1 Irf2 Irf7
AGCUGCC	-0.890
CDC5L.p2	-0.900	Cdc5l
TLX1..3_NFIC{dimer}.p2	-0.908	Tlx1 Tlx3	$logo of TLX1..3_NFIC{dimer}.p2$
NKX2-3_NKX2-5.p2	-0.914	Nkx2-5 Nkx2-3
NFKB1_REL_RELA.p2	-0.921	Rela Rel Nfkb1
GATA6.p2	-0.954	Gata6
RXR{A,B,G}.p2	-0.959	Rxra Rxrb Rxrg
bHLH_family.p2	-0.962	Arntl Mitf Mxi1 Tcfe3 Clock Olig2 Mxd4 Hey2 Hey1 Heyl Mlxipl Hes6 Mxd3 Arntl2 Id1 Mnt Olig1 Npas2
ACAGUAU	-0.972
ESR1.p2	-0.998	Esr1
CREB1.p2	-1.013	Creb1
CACAGUG	-1.013
JUN.p2	-1.020	Jun Jund Junb
HNF1A.p2	-1.029	Hnf1a
GTF2A1,2.p2	-1.059	Gtf2a1 Gtf2a2
HIF1A.p2	-1.068	Hif1a
POU5F1_SOX2{dimer}.p2	-1.078	Pou5f1 Sox2	$logo of POU5F1_SOX2{dimer}.p2$
XBP1.p3	-1.107	Xbp1
NANOG.p2	-1.152	Nanog
AAAGUGC	-1.167
ONECUT1,2.p2	-1.236	Onecut2 Onecut1
EP300.p2	-1.328	Ep300
UAUUGCU	-1.351
UGCAUAG	-1.449
RORA.p2	-1.458	Rora
TFEB.p2	-1.473	Tcfeb
HIC1.p2	-1.532	Hic1
MYBL2.p2	-1.546	Mybl2
MEF2{A,B,C,D}.p2	-1.621	Mef2a Mef2c Mef2d Mef2b
MTF1.p2	-1.630	Mtf1
TFAP4.p2	-1.666	Tcfap4
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.737	Fos Junb Fosl1 Jund Fosb	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NR1H4.p2	-1.744	Nr1h4
ZNF238.p2	-1.821	Zfp238
NR5A1,2.p2	-1.826	Nr5a1 Nr5a2
HES1.p2	-1.847	Hes1
NFIL3.p2	-1.872	Nfil3
CUUUGGU	-1.875
STAT2,4,6.p2	-2.010	Stat2 Stat4 Stat6
POU2F1..3.p2	-2.131	Pou2f2 Pou2f1 Pou2f3
SMAD1..7,9.p2	-2.276	Smad5 Smad1 Smad3 Smad4 Smad2 Smad6 Smad7 Smad9
ELF1,2,4.p2	-2.465	Elf2 Elf1 Elf4
HNF4A_NR2F1,2.p2	-2.482	Nr2f1 Nr2f2 Hnf4a
TFDP1.p2	-2.950	Tfdp1
TFAP2{A,C}.p2	-3.139	Tcfap2c Tcfap2a
CCCUGAG	-3.719
TEAD1.p2	-3.925	Tead1 Tead2 Tead3 Tead4
AAGGCAC	-3.993
E2F1..5.p2	-4.238	E2f4 E2f5 E2f2 E2f1 E2f3
NFY{A,B,C}.p2	-5.944	Nfyc Nfyb Nfya

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Sample name: cerebellum, embryo E15, biol_rep2 (E15R2)

Sorted z-values for every WM.